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Characterization and Molecular Phylogenetic Analysis of Subfamily Erebinae (Lepidoptera: Noctuoidea: Erebidae) Using Five Complete Mitochondrial Genomes
Biochemical Genetics ( IF 2.4 ) Pub Date : 2023-10-27 , DOI: 10.1007/s10528-023-10528-0
Rauf Ahmad Shah 1 , Muzafar Riyaz 1 , Savarimuthu Ignacimuthu 2, 3 , Kuppusamy Sivasankaran 1
Affiliation  

In this study, the complete mitogenomes of Sympis rufibasis, Lacera noctilio, Oxyodes scrobiculata, Mocis undata, and Artena dotata were newly sequenced to bring up-to-date the database using the next-generation sequencing methods. The gene order of all sequenced mitogenomes was identical consisting of 13 protein-coding genes (PCGs), 22 transfer RNA genes (tRNAs), two ribosomal RNA genes (rRNAs), and a non-coding A+T-rich region, which were common to other Lepidopteran insects. All protein-coding genes (PCGs) initiated with a canonical ATN codon and ended with TAN or an incomplete stop codon, single T. The A+T-rich region of S. rufibasis, L. noctilio, O. scrobiculata, M. undata, and A. dotata are 406 bp, 462 bp, 372 bp, 410 bp, and 406 bp long, respectively, containing number of characteristics that are distinctive to Noctuoidea moths. We analyzed concatenated amino acid sequences of protein-coding genes not including rRNAs, using Maximum Likelihood and Bayesian Inference methods. The phylogenetic analyses indicated that the tribe relationships within Erebinae were reconstructed as (Sypnini+((Erebini 1+Poaphilini 1)+((Euclidiini+Catocalini+(Hypopyrini+Erebini 2))+((Hulodini+(Poaphilini 2+Ophiusini))))). Phylogenetic analyses supported and confirmed the monophyly of the subfamilies’ relationships as follows: (Hypeninae+Lymantriinae)+((Scoliopterginae+((Calpinae+Erebinae)+((Herminiinae+Aganainae)+Arctiinae)))) within Erebidae.



中文翻译:

使用五个完整线粒体基因组对 Erebinae 亚科(鳞翅目:Noctuoidea:Erebidae)进行表征和分子系统发育分析

在本研究中,对Sympis rufibasisLacera noctilioOxyodes scrobiculataMocis undataArtena dotata的完整线粒体基因组进行了新测序,以使用下一代测序方法更新数据库。所有测序的有丝分裂基因组的基因顺序都是相同的,由 13 个蛋白质编码基因 (PCG)、22 个转移 RNA 基因 (tRNA)、2 个核糖体 RNA 基因 (rRNA) 和一个非编码 A+T 丰富区域组成。与其他鳞翅目昆虫常见。所有蛋白质编码基因 (PCG) 均以规范的 ATN 密码子起始,以 TAN 或不完全终止密码子(单个 T)结束。S. rufibasis、L. noctilio、O. scrobiculata、M. undata的 A+T 丰富区域、A. dotata 的长度分别为 406 bp、462 bp、372 bp、410 bp 和 406 bp,包含许多 Noctuoidea 蛾的独特特征。我们使用最大似然法和贝叶斯推理方法分析了不包括 rRNA 的蛋白质编码基因的串联氨基酸序列。系统发育分析表明,Erebinae内的部落关系重建为(Sypnini+((Erebini 1+Poaphilini 1)+((Euclidiini+Catocalini+(Hypopyrini+Erebini 2))+((Hulodini+(Poaphilini 2+Ophiusini)))))系统发育分析支持并证实了Erebidae内各亚科关系的单系性如下:(Hypeninae+Lymantriinae)+((Scoliopterginae+((Calpinae+Erebinae)+((Herminiinae+Aganainae)+Arctiinae))))。

更新日期:2023-10-29
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