J. Asiat. Soc. Bangladesh, Sci. 45(2): 189-201, December, 2019
NEW RECORDS OF THE GOATFISH, UPENEUS VITTATUS (FORSSKAL
1775) AND UPENEUS SUPRAVITTATUS (UIBLEIN AND HEEMSTRA 2010)
(PRECIFORMES, MULLIDAE), FROM SAINT MARTIN’S ISLAND IN THE
BAY OF BENGAL, BANGLADESH
SHILPI SAHA1, SUBRINA SEHRIN1, ABDULLAH-AL-MASUD1 , KAZI AHSAN HABIB2,
ANIRBAN SARKER 1, MOHAMMAD ABDUL BAKI*1
1
Department of Zoology, Jagannath University, Dhaka-1100, Bangladesh
2
Department of Fisheries, Sher-e-Bangla Agricultural University, Dhaka-1207, Bangladesh
Abstract
Genus Upeneus distributed in Indo-Pacific, South Africa, north to southern Japan and
south to New Caledonia. Although there is difficulty in identifying accurately goatfish
solely on the basis of morphology, U. vittatus and U. supravittatus were confirmed by
both using morphological characters and DNA barcoding cytochrome oxidase I
subunit (COI) approach for the first time in St. Martin’s Island, Bay of Bengal,
Bangladesh. Increased number of species of the genus Upeneus was found in
Bangladesh from 3 to 5 and extended the distribution range.
Key words: Coral ecosystem, Cytochrome oxidase I subunit (COI), Morphomeristics,
New record, Upeneus vittatus, U. supravittatus
Introduction
The goatfishes (Perciformes: Mullidae) are characterized by a pair of long barbels at
the front of the chin, two well-separated dorsal fins with 7 or 8 spines and a deeply
forked caudal fin. The family Mullidae consisted of 6 genera that are differentiated
mainly by dentition as shown in the key of Lachner in Schultz and collaborators
(1960). Species of Upeneus are only ones with teeth in both jaws and on the vomer and
palatines. There are 29 species of the genus Upeneus (Uiblein and Heemstra 2011,
Yamashita et al. 2011) found in shallow coastal waters above 100 m. The yellow
striped goatfish, Upeneus vittatus (Kuiter and Tonozuka 2001) is a marine, brackish,
coral reef associated fish species. Sandy lagoons, sheltered coastal waters and also
muddy bottoms (Fischer et al. 1990) are preferred habitats of U. vittatus. This species
is euryhaline (Lewis and Pring 1986), benthopelagic (Mundy 2005) often found in
groups (Lieske and Myers 1994) and feeds primarily on small crustaceans (Sousa and
Dias 1981). The long fin goatfish, U. supravittatus (Uiblein and Heemstra 2010) is a
marine, coral reef associated fish species. They use their two sensitive chin barbels to
dig into the sediment to locate food items. Invertebrates such as small crustaceans and
worms are hunted by small goatfish that forage on the bottom in loose schools. In
contrast, large individuals (20 - 40 cm in length) also feed on small fishes (Sea-Ex). At
present, only three species of this genus, U. sulphureus (Tomascik 1997), U. sundaicus
and U. tragula (Rahman et al. 2009) have been recorded in Bangladesh and studied
* Author for correspondence: <mabaki@gmail.com>.
190
Saha et al.
only on the basis of morphological characters. However, specimens of Upeneus are
often difficult to identify to species, as a promising alternative to the traditional species
identification based on morphological characters, partial cytochrome c oxidase subunit
I (COI) sequences (DNA barcodes) have been suggested for standardized and routine
species identification (Hebert et al. 2003). Newly generated DNA barcodes can be
analyzed together with available data (shown in bold face overleaf) to resolve
taxonomic conflicts. Although barcodes for almost one-third (10,267) of all described
fish species are already available (Ward 2012), the permanent addition of new barcode
data is indispensable to increase the taxonomic resolution. The present study to identify
U. vittatus and U. supravittatus was based on morphomeristics as well as DNA
barcoding for the first time in Bangladesh, and distinguished from each other and also
from other Upeneus spp. recorded before in Bangladesh.
Materials and Methods
Sample collection: Fish specimens were collected on 14 December, 2015 from local
fishermen of St. Martin’s Island (Fig. 1) (20° 34'N - 20° 38.8'N and 92°18'E 92°20.8'E) who collected these fishes using gear named ber jal which is one kind of
seine net and not destructive. Specimens were collected in full accordance with local
government regulation, and in compliance with appropriate animal care standards.
After that specimens were carried with cooling box to −20℃ in Fisheries laboratory,
Department of Zoology, Jagannath University, Dhaka until further study. After study,
all specimens were deposited in the museum of Zoology Department, Jagannath
University as voucher specimen with registration number Upeneus vittatusF1215SM02 and Upeneus supravittatus-F1215SM03.
Morphological studies: Morphometric and meristic characters were compared with
previous records by Uiblein and Heemstra (2010) from Western Indian Ocean and
other 3 species of Upeneus already recorded from Bangladesh water. Lengths were
measured in cm scale and weight in gm. The meristic abbreviations used in this study
are as follows: D1, first dorsal fin; D2, second dorsal fin; P, pectoral fin; V, pelvic fin;
A, anal fin; C, caudal fin; Li, lateral-line scale; aLi, transverse scale above lateral-line;
bLi, transverse scale below lateral-line; Br, branchiostegal ray. Detailed
morphomeristics study was carried out.
Molecular phylogenetic studies: Intra- and inter-specific genetic distances were
determined using a molecular marker cytochrome oxidase subunit I (COI) gene of
mitochondrial DNA. Muscle tissue was isolated from just below the dorsal fin. DNA
was extracted by TIANamp Marine Animal DNA Kit. Approximately 700 bp were
amplified from the 5' region of the COI gene using C FishF1t1/C FishR1t1 primer
cocktails (Ivanova et al. 2007) due to its high effectiveness in generating amplicons
that sequence cleanly for the DNA barcode region of diverse fish taxa and other groups
of vertebrate. There are two primers (FishF2 t1/VF2 t1) for cocktail C FishF1t1 and
New records of the goatfish
191
also two primers (FishR2 t1/FR1d t1) for C FishR1t1. To facilitate sequencing of
products, all PCR primers were tailed with M13 sequences. The primer’s nucleotide
sequences were:
VF2_t1-5'-*TGTAAAACGACGGCCAGTCAACCAACCACAAAGACATTGGCC -3'
FishF2_t1-5'-*TGTAAAACGACGGCCAGTCGACTAATCATAAAGATATCGGCAC-3'
FishR2_t1-5'-*CAGGAAACAGCTATGACACTTCAGGGTGACCGAAGAATCAGA-3'
FR1d_t1-5'-*CAGGAAACAGCTATGACACCTCAGGGTGTCCGAARAAYCARAA-3'
[∗The M13 primer sequence in bold face]
The PCR reactions were carried out in 20 μl reaction mixture containing 6.0 μl of
distilled water, 10 µl of master mix, 1 μl of each primer (5 μmol/l) and 2 μl of DNA
template. The thermal regime consisted of an initial step of 2 min at 94℃ followed by
35 cycles of 30 sec at 94℃, 40 sec at 52℃, and 1 min at 72℃, followed in turn by 10
min at 72℃. Then soak at 4℃. PCR products were purified by using QIAquick PCR
purification kit. After purification, the products were sequenced in both directions by
using commercial sequencer, Macrogen, Korea. Sequences were manually edited using
the software Chromas Lite. For phylogenetic analysis, COI sequences of same species
and species in the same genus were downloaded from GenBank. The species and their
GenBank accession numbers are following: KX024776 for U. vittatus; KR057896 for
U. supravittatus; KP293705, KP293708 for U. suahelicus; EF607613, EF607614 for
U. tragula; JN313348 for U. sulphureus and FJ237883 for Parupeneus indicus. The
software MEGA 6 (Tamura et al. 2013) was used for alignment and construction of
neighbor-joining tree (Saitou and Nei 1987) on the basis of evolutionary distances
calculated using the Kimura two parameter (K2P) model (Kimura 1980), where
bootstrapping replications were 1000. Molecular phylogenetic analysis was conducted
in the Aquatic Biodiversity Research Laboratory, Department of Fisheries, Sher- eBangla Agricultural University, Dhaka-1207, Bangladesh.
Results and Discussion
Upeneus vittatus (Forsskal 1775)
Identification: The morphometric measurements of this species are provided in Table 1
and meristics in Table 2. Body elongated, laterally compressed, dorsal profile convex
slightly and moderate in size. Head medium and obtuse. Large, rounded, highly
protractile, superior mouth placed sub-terminally with large mouth gap. Unequal jaws
with cardiform teeth, also present on palatine and vomer. Two barbels present on chin.
Large operculum with flap and large opercular opening. Lateral line is single, complete
and curved. Scales are ctenoid, rhomboidal, large and overlapping. Dorsal fin double,
separate, medium and situated at the middle of the body, which starts from the middle
of pectoral fin and reaches up to the just opposite to end of anal fin, having spines in
front. Pectoral fin large, wide spread and placed ventro-laterally. Pelvic fin moderate in
192
Saha et al.
size and present at the forward. Anal fin medium, contains spines in front and reaches
up to the opposite of 2nd dorsal fin. Caudal fin forked and homocercal type.
Fig. 1. Location of new and old record of Upeneus vittatus and U. supravittatus species in the
St. Martin’s Island, Bay of Bengal, Bangladesh.
Coloration: Body reddish dorsally, silver ventrally in fresh fish. Four golden
stripespresent, among them 2 mid lateral, one starts from eye and extends up to base of
caudal fin, attaches the adjacent bar of upper caudal fin lobe and the other stripe starts
from below of pectoral fin base and extends up to caudal peduncle and joined by
adjacent bar of lower caudal fin lobe; 2 dorsolateral stripes, where lower one well
defined, starts from operculum and extends up to behind of second dorsal fin, the upper
one ambiguous and much shorter, starts from below of first dorsal fin origin and
surrounded dorsally by a horizontal series of pale spots (Fig. 2a). Two yellow stripes
present on white membrane in both dorsal fin and a broad black spot on the tip of
1stdorsal fin anteriorly, the straight length of the black spot similar in size to broadness
of broadest lower caudal fin lobe bar (Fig. 2c); reddish pectoral, brown pelvic, reddish
New records of the goatfish
193
anal fin and yellowish patches along pelvic and anal fin bases; five yellow black
oblique bars on upper lobe of caudal fin and 3 on lower (Fig. 2e) those increasing
distally in width with the widest distal-most bar black or dark brown, while the other
bars are yellow blackish; broadness of broadest lower caudal fin lobe bar and/or light
colored gap between bars that are most distally located equal to or larger than eye
diameter; light colored tip of lower fin lobe. Barbels are white.
Fig. 2. (a) Upeneus vittatus (10.6 cm SL), (b) Upeneus supravittatus (11.1 cm SL), (c) dorsal fin
of Upeneus vittatus, (d) dorsal fin Upeneus supravittatus, (e) caudal fin of Upeneus
vittatus and (f) caudal fin of Upeneus supravittatus.
Upeneus supravittatus (Uiblein and Heemstra 2010)
Identification: The morphometric measurements of this species are provided in Table 3
and meristics in Table 4. Body elongated, laterally compressed, dorsal profile convex
slightly and moderate in size. Head medium and obtuse. Large, rounded, highly
protractile, superior mouth placed sub-terminally with large mouth gap. Unequal jaws
194
Saha et al.
with cardiform teeth, also present on palatine and vomer. Two barbels present on chin.
Large operculum with flap and large opercular opening. Lateral line single, complete
and curved. Scales are ctenoid, rhomboidal, large and overlapping. Dorsal fin double,
separate, medium and situated at the middle of the body, which starts from the middle
of pectoral fin and reaches upto the just opposite to end of anal fin, having spines in
front. Pectoral fin large, wide spread and placed ventro-laterally. Pelvic fin moderate in
size and present at the forward. Anal fin medium, contains spines in front and reaches
upto the opposite of 2nd dorsal fin. Caudal fin forked and heterocercal, lower lobe
slightly shorter than upper.
Table 1. Morphometric measurements of Upeneus vittatus from Bangladesh and comparative materials
reported from other places.
Characteristics
Measurements Uiblein and
Heemstra Characteristics
(Present
(2010)
study)
Measurements
(Present study)
Uiblein
and
Heemstra
(2010)
Percentage of standard length
10.38 (1st)
-
Longest anal fin
ray length
16.98
15-16
-
Pectoral fin base
length
5.66
-
9.43
-
Longest pectoral
fin ray length
25.47
22-24
Caudal peduncle
length
18.87
-
Pelvic fin base
length
4.71
-
Caudal concavity
20.75
-
Longest pelvic fin
ray length
19.81
18-21
Caudal fin base
length
12.26
-
Barbel length
19.81
17-21
Predorsal length
44.34
-
Inter-orbital length
9.43
-
Preanal length
73.58
-
Preorbital length
12.26
-
Prepectoral length
44.34
-
Post-orbital length
14.15
-
Prepelvic length
37.74
-
Eye diameter
9.43
7.0-8.7
Head length
35.85
-
Longest anal spine
Body depth
29.25
-
Body width
17.92
Caudal peduncle
depth
First dorsal fin height
23.5
22-25
Snout length
7.56
-
Dorsal fin base
length (1st)
21.70
-
Upper jaw length
14.15
11-13
Dorsal fin base
length (2nd)
14.15
-
Lower jaw length
9.43
-
Longest dorsal spine
23.58(1st)
-
Jaw gap
15.09
-
Anal fin base length
12.26
-
New records of the goatfish
195
Table 2. Meristic features of Upeneus vittatus and comparative materials reported from other places.
Characteristics
D1
D2
P
V
A
C
Li
aLi
bLi
Br
Present
study
Uiblein and
Heemstra
(2010)
Kuiter and
Tonozuka
(2001)
FAO
(1983a)
FAO
(1983b)
FAO
(1983c)
36-38
-
VIII
-
VII-VIII
I/9 br
13 to 17
I/5
-
I/6-7
-
13 br
-
VII
I/8 br
14
I/5 br
I/6 br
13 br
37
2
6
2 pair
Table 3. Morphometric measurements of Upeneus supravittatus from Bangladesh and comparative
materials reported from other places.
Measurements
(Present
study)
Percentage of standard length
Head length
33.33
Characteristics
Uiblein and
Heemstra
(2010)
30-33
Characteristics
Measurements
(Present
study)
Uiblein and
Heemstra
(2010)
11.71
-
15.32
14-17
6.31
-
26.13
25-28
5.41
-
Body depth
27.93
26-29
Body width
16.22
-
Caudal peduncle
depth
Caudal peduncle
length
Caudal
concavity
Caudal fin base
length
Predorsal length
Preanal length
Prepectoral
length
Prepelvic length
First dorsal fin
height
Dorsal fin base
length (1st)
Dorsal fin base
length (2nd )
Longest dorsal
spine
10.81
9.9-11
19.82
-
13.51
-
11.71
-
Anal fin base
length
Longest anal fin
ray length
Pectoral fin base
length
Longest pectoral
fin ray length
Pelvic fin base
length
Longest pelvic fin
ray length
Barbel length
42.34
72.07
34.23
-
Interorbital length
Preorbital length
Postorbital length
9.0
11.71
13.51
-
36.04
26.1
23-26
Eye diameter
Snout length
8.12
6.31
6.8-8.5
-
17.12
-
Upper jaw length
12.61
12-14
14.41
-
Lower jaw length
12.61
-
26.13 (2nd )
-
Jaw gap
9.0
-
19.82
18-21
19.82
19-23
196
Saha et al.
Table 4. Meristic features of Upeneus supravittatus and comparative materials reported from other
places.
Characteristics
D1
D2
P
V
A
C
Li
aLi
bLi
Br
Present
study
VII
I/8 br
14
I/5 br
I/6 br
17 br
35
2
6
2 pair
Uiblein and
Heemstra
(2010)
34-36
-
Kuiter and
Tonozuka
(2001)
VIII
-
FAO
(1983a)
FAO
(1983b)
FAO
(1983c)
VII-VIII
I/9 br
16 to 17
I/5
-
I/6-7
-
13 br
-
Coloration: Body reddish dorsally, silver ventrally in fresh fish which become pale
after preservation. Two yellow stripes present on body (Fig. 2b), one starts from behind
head and extends up to base of caudal fin, attaches the adjacent bar of upper caudal fin
lobe and the other stripe starts from below of pectoral fin base and extends up to caudal
peduncle and joined by adjacent bar of lower caudal fin lobe. In both dorsal fin 2
yellow stripes present on white membrane and the tip of first dorsal fin black (Fig. 2d).
Reddish pectoral, brown pelvic, reddish anal fin and yellowish patches along pelvic
and anal-fin bases; total 9 bars on caudal fin, 5 yellow blackish bars on upper caudalfin lobe, 4 bars on lower lobe, increasing distally in width (Fig. 2f). Barbels are white.
Although U. vittatus and U. supravittatus at a glance are very similar but have distinct
morphological difference and also clearly different from other three Upeneus spp. such
as U. sulphureus, U. sundaicus and U. tragula which were recorded before in
Bangladesh. So, comparative morphological difference among these five Upeneus spp.
are summarized in Table 5.
Sequence analysis of the COI gene: COI gene fragments of single U. vittatus and U.
supravittatus individual were amplified. Both the COI sequences were submitted to
GenBank with the following accession numbers: MG099705 for U. vittatus and
MG196640 for U. supravittatus. Including the eight downloaded COI sequences of
family Mullidae, totally ten sequences were used in the analysis and their accession
number with sampling location were shown in the associated figure. COI sequences of
U. vittatus and U. supravittatus showed 100% similarity with COI sequences of the
respected species in NCBI (https://blast.ncbi.nlm.nih.gov/Blast.cgi). The mean
interspecies evolutionary divergence was 0.2 - 16.3% between U. vittatus and other
five species of family Mullidae while 0.2 - 16.1% between U. supravittatus and other
five species of family Mullidae (Table 6).
New records of the goatfish
197
Table 5. Comparison of U. vittatus and U. supravittatus and 3 other species of Upeneus previously
recorded from Bangladesh.
Body stripe
Body color
U. vittatusa,b
4 golden
Reddish
dorsally, silver
ventrally
U. supravittatusa,b
2 yellow
Reddish dorsally,
silver ventrally
Absent
Spot, stripeor Broad black
patch on
spot on the tip
dorsal fin
of 1st dorsal fin
Bar on caudal 5 yellow black
fin
oblique bars on
upper lobe and
3 on lower
Lateral line
37 (36-38)
scales
Scales
2/6
above/below
lateral line
a
U. sulphureusa,b
2 yellow
Pale brown
dorsally, white
ventrally
1stdorsal fin tip
black
U. sundaicusa,b
1broad yellow
Light reddish
dorsally, white
ventrally with
yellow-green
ventral margin
3 red stripes
U. tragulaa,b
1 broad black
Light greenish
dorsally,
whitish
ventrally
3/5
35 (34-36)
34(34-37)
2 black and 2
white patches
present
alternately
5 red bars on
4 blackish
upper lobe and no oblique bars on
bar on lower lobe upper lobe and
5 on lower
34 (31-34)
31 (28-31)
2/6
2/4
3/5
5 black oblique
No bar
bars on upper lobe
and 4 on lower
Present study; bUiblein and Heemstra (2010) and reference values are shown in parentheses.
The construction of Neighbor-joining tree was done on the basis of K2P model, where
replications of bootstrapping test was 1000. In the phylogenetic tree (Fig. 3) U. vittatus
and U. supravittatus clustering together and they are apparently also very similar but
with distinct difference in morphology.
Fig. 3. Neighbor-joining tree constructed using the K2P model for COI gene sequences of six
species of Upeneus with Parupeneus indicus as the outgroup.
198
Saha et al.
Table 6. Mean interspecies genetic distances (K2P) between six species of family Mullidae.
U. vittatus
U. supravittatus
U. suahelicus
U. sulphureus
U. tragula
U. vittatus
U. supravittatus
0.002
U. suahelicus
0.009
0.008
U. sulphureus
0.118
0.116
0.115
U. tragula
0.158
0.156
0.152
0.159
Parupeneus indicus
0.163
0.161
0.155
0.183
0.198
There are a few reports on the occurrence of Upeneus species in Bangladesh. For
example, only three species of this genus, U. sulphureus (Tomascik 1997), U.
sundaicus and U. tragula (Rahman et al. 2009) are reported in Bangladesh waters
based on their identification only on external morphological characters. However,
misidentifications are known to result from damaged or poor specimens and
ambiguous morphological features (Arai and Wong 2016). Morphological characters
are ineffective to distinguish species at some stages of development (Ward et al. 2009).
Several authors have suggested that molecular genetic analyses are necessary for
precise species confirmation (Arai et al. 2015, Arai and Wong 2016, Kadir et al. 2017).
However, on the basis of morphological characters and DNA barcoding, U. vittatus
and U. supravittatus were newly recorded in Bangladesh that is very data poor area.
Photographs, counts and measurements were taken for morphological characters, then
comparison of the present study was done with the reports of Uiblein and Heemstra
(2010), Kuiter and Tonozuka (2001) and FAO (1983a,b,c). Even though some do not
precisely fall into the range reported by others, due to differences in growth rate and
sampling size for some of the characters that either overlap or span the range. The K2P
distance between U. vittatus and U. supravittatus is 0.2%. This is lower than threshold
of species delimitation 3.5% (Ward et al. 2005, 2009). This may be due to lower
genetic diversity between closely related and apparently morphologically similar
species of the genus Upeneus such as U. supravittatus and U. suahelicus have only
0.8% genetic divergence (Uiblein and Gouws 2015) that is also lower than threshold of
species delimitation 3.5% (Ward et al. 2005, 2009).For more confirmation need further
study such as Kruck et al. 2013 suggested that when CO1 revealed low interspecific
variation which is insufficient for genetic distance-based species identification and
mismatch among morphological identifications then multi-gene spot test approach and
efficient markers (recombination activating gene 2 in combination with NADH
dehydrogenase 2 and ATP synthase) may help identifying problematic fish species.
New records of the goatfish
199
Conclusion
For the first time in Bangladesh Upeneus vittatus and U. supravittatus were recorded
based on both morphomeristics and DNA barcoding. The morphomeristics descriptions
are compatible with descriptions of these species given by Zoologists. Moreover, these
two species and other three previous Bangladeshi Upeneus species can be
distinguished from each other by combination of characters like body stripe, body
color, spot, stripe or patch on dorsal fin, bar on caudal fin, lateral line scales and scales
above and below the lateral line. Although U. vittatus and U. supravittatus have low
genetic variation but significant difference from other species of the same genus that
were also confirmed from comparative COI sequence analysis of the present study with
reference sequences. Therefore, U. vittatus and U. supravittatus are valid species at the
genetic level.
Acknowledgements
Authors are grateful to the authority of SAU-KIOST collaborative project “Exploration
of Coastal and Marine Biological Resources of Bangladesh” and Ministry of National
Science and Technology for financial support in molecular part of this research work
and local people of St. Martin’s Island for collection of fish.
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